运行和验证

操作步骤

1. 使用PuTTY工具，以root用户登录服务器。
2. 执行以下命令，进入可执行文件的安装目录。

   cd /path/to/GEMMA/GEMMA-0.98.1/bin

3. 执行以下命令，运行算例。

   ./gemma -g ../example/mouse_hs1940.geno.txt.gz -p ../example/mouse_hs1940.pheno.txt -gk -o mouse_hs1940

   运行完成后，将回显以下信息。

   GEMMA 0.98.1 (2018-12-10) by Xiang Zhou and team (C) 2012-2018
   Reading Files ...
   ## number of total individuals = 1940
   ## number of analyzed individuals = 1410
   ## number of covariates = 1
   ## number of phenotypes = 1
   ## number of total SNPs/var        =    12226
   ## number of analyzed SNPs         =    10768
   Calculating Relatedness Matrix ...
   ================================================== 100%
   **** INFO: Done.