环境要求

CPU

鲲鹏920处理器

HISAT2

2.1.0

https://github.com/infphilo/hisat2

sse2neon.h

master

https://raw.githubusercontent.com/DLTcollab/sse2neon/master/sse2neon.h

bdgp6.tar.gz

NA

ftp://ftp.ccb.jhu.edu/pub/infphilo/hisat2/data/bdgp6.tar.gz

GTF文件

Homo_sapiens.GRCh38.86.chr.gtf.gz

ftp://ftp.ensembl.org/pub/release-86/gtf/homo_sapiens/Homo_sapiens.GRCh38.86.chr.gtf.gz

FASTQ文件

R1.fq.gz

http://opengene.org/data/R1.fq.gz

FASTQ文件

R2.fq.gz

http://opengene.org/data/R2.fq.gz

FASTA文件

Drosophila_melanogaster.BDGP6.dna.toplevel.fa.gz

https://ftp.ensembl.org/pub/release-84/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP6.dna.toplevel.fa.gz

CentOS

7.6

https://www.centos.org/download/

Kernel

4.14.0-115

包含在操作系统镜像中。