软件要求如表2所示。
项目 |
版本 |
下载地址 |
---|---|---|
Perl |
5.28.0 |
openEuler OS自带。 |
GCC |
7.3.0 |
openEuler OS自带。 |
MPICH |
mpich2-1.5 |
https://www.mpich.org/static/downloads/1.5/mpich2-1.5.tar.gz |
BLAST |
2.9.0 |
https://ftp.ncbi.nlm.nih.gov/blast/executables/blast+/2.9.0/ncbi-blast-2.9.0+-src.tar.gz |
RMBlast |
2.2.28 |
https://ftp.ncbi.nlm.nih.gov/blast/executables/rmblast/2.2.28/ncbi-rmblastn-2.2.28-src.tar.gz |
SNAP |
2013-11-29 |
|
TRF |
4.09.1 |
https://codeload.github.com/Benson-Genomics-Lab/TRF/tar.gz/refs/tags/v4.09.1 |
RepeatMasker |
4.0.7 |
|
Exonerate |
2.2.0 |
http://ftp.ebi.ac.uk/pub/software/vertebrategenomics/exonerate/exonerate-2.2.0.tar.gz |
MAKER |
2.31.11 |