环境要求

CPU

鲲鹏920处理器

Picard

2.23.3

https://github.com/broadinstitute/picard/releases/download/2.23.3/picard.jar

Samtools

0.1.9

https://codeload.github.com/samtools/samtools/tar.gz/0.1.9

测试算例

hg19

http://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/hg19.fa.gz

SRR742200_1

http://ftp.sra.ebi.ac.uk/vol1/fastq/SRR742/SRR742200/SRR742200_1.fastq.gz

SRR742200_2

http://ftp.sra.ebi.ac.uk/vol1/fastq/SRR742/SRR742200/SRR742200_2.fastq.gz

hs38DH

https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/001/405/GCA_000001405.15_GRCh38/seqs_for_alignment_pipelines.ucsc_ids/GCA_000001405.15_GRCh38_full_analysis_set.fna.gz

CentOS

7.6

https://www.centos.org/download/

Kernel

4.14.0-115

包含在操作系统镜像中。