环境要求

CPU

鲲鹏920处理器

TopHat2

2.1.1

https://ccb.jhu.edu/software/tophat/downloads/tophat-2.1.1.tar.gz

Bowtie2

2.3.5.1

https://netix.dl.sourceforge.net/project/bowtie-bio/bowtie2/2.3.5.1/bowtie2-2.3.5.1-source.zip

SIMDe

master

https://github.com/nemequ/simde

Boost

1.70.0

https://github.com/boostorg/boost/archive/refs/tags/boost-1.70.0.tar.gz

算例文件1

R1.fq

http://opengene.org/data/R1.fq.gz

算例文件2

R2.fq

http://opengene.org/data/R2.fq.gz

算例文件3

Drosophila_melanogaster.BDGP6.dna.toplevel.fa

http://ftp.ensembl.org/pub/release-84/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP6.dna.toplevel.fa.gz

CentOS

7.6

https://www.centos.org/download/

Kernel

4.14.0-115

包含在操作系统镜像中。