配置环境变量
操作步骤
- 执行以下命令新建所有基础环境变量的modulefile。
mkdir -p /path/to/hwrf/modulefile vim /path/to/hwrf/modulfile/all
文件中添加以下内容。#%Module1.0##################################################################### # bisheng set prefix_bisheng /path/to/bisheng set version_bisheng 3.0.0 setenv BISHENG_PATH /path/to/bisheng prepend-path PATH $prefix_bisheng/lib/clang/15.0.4/bin:$prefix_bisheng/bin prepend-path LD_LIBRARY_PATH $prefix_bisheng/lib:$prefix_bisheng/lib/clang/15.0.4/lib prepend-path INCLUDE $prefix_bisheng/include:$prefix_bisheng/lib/clang/15.0.4/include # hmpi set prefix_hmpi /path/to/hmpi set version_hmpi 1.3.0 setenv HMPI_PATH /path/to/hmpi setenv OPAL_PREFIX /path/to/hmpi setenv HMPI_DIR ${prefix_hmpi} setenv HMPI_LIB ${prefix_hmpi}/lib setenv HMPI_INC ${prefix_hmpi}/include setenv MPI_DIR ${prefix_hmpi} setenv MPI_LIB ${prefix_hmpi}/lib setenv MPI_INC ${prefix_hmpi}/include prepend-path PATH $prefix_hmpi/hucx/bin:$prefix_hmpi/xucg/bin:$prefix_hmpi/bin prepend-path LD_LIBRARY_PATH $prefix_hmpi/hucx/lib:$prefix_hmpi/lib:$prefix_hmpi/xucg/lib prepend-path INCLUDE $prefix_hmpi/include:$prefix_hmpi/include/openmpi/opal/mca/hwloc/hwloc201/hwloc/include:$prefix_hmpi/include/openmpi/opal/mca/event/libevent2022/libevent/include:$prefix_hmpi/include/pmix/src/include:$prefix_hmpi/hucx/include:$prefix_hmpi/xucg/include # kml set prefix_kml /path/to/kml set version_kml 2.0.0 setenv KML_BISHENG_PATH /path/to/kml setenv KML_LIB ${prefix_kml}/lib prepend-path LD_LIBRARY_PATH $prefix_kml/lib prepend-path INCLUDE $prefix_kml/include # hdf5 set prefix_hdf5 /path/to/hdf5 set version_hdf5 1.12.0 setenv HDF5_CLANG_PATH /path/to/hdf5 setenv HDF5 ${prefix_hdf5} setenv HDF5_DIR ${prefix_hdf5} setenv HDF5_LIB ${prefix_hdf5}/lib setenv HDF5_INC ${prefix_hdf5}/include setenv PHDF5 ${prefix_hdf5} setenv PHDF5_DIR ${prefix_hdf5} setenv PHDF5_LIB ${prefix_hdf5}/lib setenv PHDF5_INC ${prefix_hdf5}/include prepend-path PATH $prefix_hdf5/bin prepend-path LD_LIBRARY_PATH $prefix_hdf5/lib prepend-path INCLUDE $prefix_hdf5/include # pnetcdf set prefix_pnetcdf /path/to/pnetcdf set version_pnetcdf 1.12.1 setenv PNETCDF_PATH /path/to/pnetcdf setenv PNETCDF ${prefix_pnetcdf} setenv PNETCDF_DIR ${prefix_pnetcdf} setenv PNETCDF_LIB ${prefix_pnetcdf}/lib setenv PNETCDF_INC ${prefix_pnetcdf}/include prepend-path PATH $prefix_pnetcdf/bin prepend-path LD_LIBRARY_PATH $prefix_pnetcdf/lib prepend-path INCLUDE $prefix_pnetcdf/include # netcdf set prefix_netcdf /path/to/netcdf set version_netcdf c_4.7.4_fortran_4.5.3_cxx_4.2 setenv NETCDF_CLANG_PATH /path/to/netcdf setenv NETCDF ${prefix_netcdf} setenv NETCDF_DIR ${prefix_netcdf} setenv NETCDF_LIB ${prefix_netcdf}/lib setenv NETCDF_INC ${prefix_netcdf}/include prepend-path PATH $prefix_netcdf/bin prepend-path LD_LIBRARY_PATH $prefix_netcdf/lib prepend-path INCLUDE $prefix_netcdf/include # jasper set prefix_jasper /path/to/jasper set version_jasper 1.900.2 setenv JASPER_PATH /path/to/jasper setenv JASPER ${prefix_jasper} setenv JASPER_DIR ${prefix_jasper} setenv JASPER_LIB ${prefix_jasper}/lib setenv JASPER_INC ${prefix_jasper}/include setenv JASPERLIB ${prefix_jasper}/lib setenv JASPERINC ${prefix_jasper}/include prepend-path PATH $prefix_jasper/bin prepend-path LD_LIBRARY_PATH $prefix_jasper/lib prepend-path INCLUDE $prefix_jasper/include # libpng set prefix_libpng /path/to/libpng set version_libpng 1.2.29 setenv LIBPNG_PATH /path/to/libpng setenv LIBPNG /path/to/libpng setenv LIBPNG_DIR ${prefix_libpng} setenv LIBPNG_LIB ${prefix_libpng}/lib setenv LIBPNG_INC ${prefix_libpng}/include prepend-path PATH $prefix_libpng/bin prepend-path LD_LIBRARY_PATH $prefix_libpng/lib prepend-path INCLUDE $prefix_libpng/include # zlib set prefix_zlib /path/to/zlib set version_zlib 1.2.13 setenv ZLIB_CLANG_PATH /path/to/zlib setenv ZLIB ${prefix_zlib} setenv ZLIB_DIR ${prefix_zlib} setenv ZLIB_LIB ${prefix_zlib}/lib setenv ZLIB_INC ${prefix_zlib}/include prepend-path LD_LIBRARY_PATH $prefix_zlib/lib prepend-path INCLUDE $prefix_zlib/include # other variables setenv C_INCLUDE_PATH ${prefix_bisheng}/include:${prefix_hmpi}/include:${prefix_kml}/include:${prefix_hdf5}/include:${prefix_pnetcdf}/include:${prefix_netcdf}/include:${prefix_libpng}/include:${prefix_jasper}/include:${prefix_zlib}/include setenv CXX_INCLUDE_PATH ${prefix_bisheng}/include:${prefix_hmpi}/include:${prefix_kml}/include:${prefix_hdf5}/include:${prefix_pnetcdf}/include:${prefix_netcdf}/include:${prefix_libpng}/include:${prefix_jasper}/include:${prefix_zlib}/include setenv CPLUS_INCLUDE_PATH ${prefix_bisheng}/include:${prefix_hmpi}/include:${prefix_kml}/include:${prefix_hdf5}/include:${prefix_pnetcdf}/include:${prefix_netcdf}/include:${prefix_libpng}/include:${prefix_jasper}/include:${prefix_zlib}/include setenv CPPFLAGS "-I${prefix_hdf5}/include -I${prefix_pnetcdf}/include -I${prefix_netcdf}/include" setenv LDFLAGS "-L${prefix_hdf5}/lib -L${prefix_pnetcdf}/lib -L${prefix_netcdf}/lib -lnetcdf -lnetcdff -lpnetcdf -lhdf5_hl -lhdf5 -lz -L${prefix_hmpi}/lib -lmpi -L${prefix_bisheng}/lib -lomp" setenv HWRF_DIR /path/to/hwrf setenv HWRF 1 setenv WRF_DIR /path/to/hwrf/hwrfrun/sorc/WRF setenv WRFIO_NCD_LARGE_FILE_SUPPORT 1 setenv CC mpicc setenv CXX mpicxx setenv FC mpif90 setenv F77 mpif90 setenv F90 mpif90 - 执行以下命令安装module工具。
yum install -y environment-modules source /usr/share/Modules/init/bash
- 执行以下命令加载环境。
module use /path/to/wrf/modulefile module load all
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