Install AlphaFold Dependencies
Procedure
- Use PuTTY to log in to the server as the root user.
- Install the AlphaFold dependencies.
conda install -y -c conda-forge openmm==7.5.1 cudnn==8.2.1.32 cudatoolkit==11.0.3 pdbfixer==1.7 conda install -y -c bioconda hmmer==3.3.2 hhsuite==3.3.0 kalign2==2.04
Parent topic: Configuring the Compilation Environment