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Install AlphaFold Dependencies

Procedure

  1. Use PuTTY to log in to the server as the root user.
  2. Install the AlphaFold dependencies.
    conda install -y -c conda-forge openmm==7.5.1 cudnn==8.2.1.32 cudatoolkit==11.0.3 pdbfixer==1.7
    conda install -y -c bioconda hmmer==3.3.2 hhsuite==3.3.0 kalign2==2.04