Installing Bamtools

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Use the SFTP tool to upload the Bamtools installation package to the /path/to/AUGUSTUS directory.
3. Run the following command to decompress the package:

   cd /path/to/AUGUSTUS && tar -zxf bamtools-2.5.0.tar.gz

4. Run the following command to rename and go to the installation directory:

   mv bamtools-2.5.0 bamtools && cd bamtools

5. Run the following commands to perform configuration:

   mkdir build && cd build

   cmake -DCMAKE_INSTALL_PREFIX=../ ..

6. Run the following commands to perform compilation and installation:

   make -j 16

   make install