Compiling and Installing COPASI

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Run the following command to install the dependencies:

   yum install qt.aarch64 qt-devel.aarch64 -y

3. Run the following commands to set environment variables:

   export PATH=/path/to/cmake/bin:$PATH
   export CC=`which gcc`
   export CXX=`which g++`
   export FC=`which gfortran`
   export PATH=/path/to/GNU/bin:$PATH
   export LD_LIBRARY_PATH=/path/to/GNU/lib64:$LD_LIBRARY_PATH
   export PATH=/path/to/OPENMPI/bin:$PATH
   export LD_LIBRARY_PATH=/path/to/OPENMPI/lib:$LD_LIBRARY_PATH

4. Run the following commands to decompress the official dependency package:

   cd /path/to/COPASI
   tar -xvf copasi-dependencies-4.26.213.tar.gz

5. Run the following commands to compile and install the dependencies:

   cd copasi-dependencies-4.26.213
   ./createLinux.sh

6. Run the following command to copy the files in the lib64 directory to the lib directory:

   cp -r ./bin/lib64/* ./bin/lib

7. Run the following command to decompress the COPASI installation package:

   cd /path/to/COPASI
   tar -xvf COPASI-Build-217.tar.gz

8. Run the following commands to compile and install COPASI:

   cd COPASI-Build-217/
   mkdir build
   cd build
   cmake -DBUILD_GUI=OFF -DCMAKE_INSTALL_PREFIX=/path/to/COPASI/COPASI-Build-217/build -DCOPASI_DEPENDENCY_DIR=/path/to/COPASI/copasi-dependencies-4.26.213/bin ../
   make install

9. Run the following command to add the environment variable:

   export PATH=/path/to/COPASI/COPASI-Build-217/build/bin:$PATH