Running and Verifying FASTA

Procedure

Use PuTTY to log in to the server as the root user.

Run FASTA.

export PATH=/path/to/FASTA/fasta36-36.3.8h_04-May-2020/bin:$PATH
mpirun --allow-run-as-root -np 96 ../bin/fasta36 -q ../seq/titin_hum.seq ../seq/prot_test.lseg

The following is an example of the output result:

Parent topic: FASTA 36.3.8 Porting Guide (CentOS 7.6)