Paths for Software Porting

This chapter lists the software installation paths involved in the HISAT software porting.

**Table 1** Paths for software porting
No.	Software Installation Path	Description	Remarks
1	-	Installation path of each installation package required for setting up the basic environment.	See "Paths for Software Porting" in Basic Environment Setup Guide.
2	/path/to/HISAT	Installation path of HISAT.	The installation paths are only examples. Shared paths are recommended. Replace the paths used in commands in this document with the actual paths planned during the installation process.
3	/path/to/TESTCASE	Path for storing the test cases.

Parent topic: HISAT 0.1.6 Porting Guide (CentOS 7.6)