Obtaining Source Code

Procedure

1. Download the HISAT installation package hisat-0.1.6-beta-source.zip from the following link:

   http://www.ccb.jhu.edu/software/hisat/downloads/hisat-0.1.6-beta-source.zip

2. Download the test case files R1.fq.gz, R2.fq.gz, and Drosophila_melanogaster.BDGP6.dna.toplevel.fa.gz.

   Download link 1: http://opengene.org/data/R1.fq.gz

   Download link 2: http://opengene.org/data/R2.fq.gz

   Download link 3: ftp://ftp.ensembl.org/pub/release-84/fasta/drosophila_melanogaster/dna/Drosophila_melanogaster.BDGP6.dna.toplevel.fa.gz

3. Use an SFTP tool to upload the HISAT installation package to the /path/to/HISAT directory on the server.
4. Use an SFTP tool to upload the test cases to the /path/to/TESTCASE directory on the server.