Introduction

LDBlockShow is a fast and effective tool to generate linkage disequilibrium (LD) heatmap from VCF files. It is more time and memory saving than other current tools. LDBlockShow can generate the plots of LD heatmap and interested statistics or annotation results simultaneously. In addition, it also supports subgroup analysis.

For more information, visit the official LDBlockShow website.

Programming language: Perl/HTML/C++/Shell

One-sentence description: a quick and effective tool for generating LD heat maps from VCF files

Open source license: MIT License