Introduction

Reference-Assisted Genome Ordering UTility (Ragout) is a tool for chromosome-level scaffolding using multiple references. Given initial assembly fragments (contigs/scaffolds) and one or multiple related references (complete or draft), it produces a chromosome-scale assembly (as a set of scaffolds).

Programming language: Python/C++

For more information, visit the Ragout official website.

Brief description: a tool for chromosome-level scaffolding using multiple references.

Open source license: custom open source license