Introduction

HMMER searches biological sequence databases for homologous sequences, using either single sequences or multiple sequence alignments as queries. HMMER implements a technology called "profile hidden Markov models" (profile HMMs).

For more information, visit the HMMER page at GitHub.

Programming language: C

Brief description: HMMER implements a technology called "profile hidden Markov models" (profile HMMs).

Open source license: BSD

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