Installing KmerGenie
Procedure
- Run the following command to decompress the installation package:
tar zxvf kmergenie-1.7051.tar.gz
- Run the following command to go to the directory generated after the decompression:
cd kmergenie-1.7051
- Run the following command to add compilation parameters:
- Open Makefile.
vi makefile
- Press i to enter the insert mode and modify line 8 in the makefile file as follows:
Before the modification:
CXXFLAGS ?=-O4
After the modification:
CXXFLAGS ?=-O3 -std=c++11 -march=armv8.2-a -mtune=tsv110
- Press Esc, type :wq!, and press Enter to save the file and exit.
- Open Makefile.
- Run the following commands to perform the compilation:
make
- Run the following command to set the environment variable:
export PATH=/path/to/KMERGENIE/kmergenie-1.7051:$PATH
Parent topic: Compiling and Installing KmerGenie