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(Optional) Installing MPI

Procedure

  1. Run the following command to go to the directory generated after the decompression:
    cd mafft-7.471-without-extensions/MPI
  2. Run the following commands to configure related files:
    perl -p -i -e 's#PREFIX =.*#PREFIX = /path/to/MAFFT #' Makefile
    sed -i 's/-O3/-O3 -march=armv8.2-a -mtune=tsv110 -flto/g' Makefile
  3. Run the following commands to compile and install the MAFFT extensions:
    make clean
    make
    make install