(Optional) Installing MAFFT Extensions

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Run the following command to copy the installation package to the main program installation directory:

   cp mafft-7.471-with-extensions-src.tgz  /path/to/MAFFT

3. Run the following command to decompress the installation package:

   tar -xvf  mafft-7.471-with-extensions-src.tgz

4. Run the following command to go to the directory generated after the decompression:

   cd /path/to/MAFFT/mafft-7.471-with-extensions/extensions

5. Run the following command to configure related files:

   perl -p -i -e 's#PREFIX =.*#PREFIX = /PATH/to/MAFFT #' Makefile

6. Run the following commands to compile and install the MAFFT extensions:

   make clean
   make
   make install