Installing NetCDF

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Download the installation packages.

   cd /path/to/netcdf
   wget https://codeload.github.com/Unidata/netcdf-fortran/tar.gz/refs/tags/v4.4.5 -O netcdf-fortran-4.4.5.tar.gz
   wget https://codeload.github.com/Unidata/netcdf-c/tar.gz/refs/tags/v4.7.0 -O netcdf-c-4.7.0.tar.gz

3. Decompress the NetCDF-C installation packages.

   tar xvf netcdf-c-4.7.0.tar.gz
   tar xvf netcdf-fortran-4.4.5.tar.gz

4. Go to the directory generated after the decompression.

   cd netcdf-c-4.7.0

5. Set the environment variables.

   export CC=mpicc CXX=mpicxx FC=mpifort
   export HDF5_DIR=/path/to/hdf5
   export PNETCDF_DIR=/path/to/pnetcdf

6. Compile and install NetCDF-C.

   ./configure --prefix=/path/to/netcdf --build=aarch64-unknown-linux-gnu --enable-shared --enable-netcdf-4 --enable-dap --with-pic --disable-doxygen --enable-static --enable-pnetcdf --enable-largefile CPPFLAGS="-I${HDF5_DIR}/include -I${PNETCDF_DIR}/include" LDFLAGS="-L${HDF5_DIR}/lib -L${PNETCDF_DIR}/lib -Wl,-rpath=${HDF5_DIR}/lib -Wl,-rpath=${PNETCDF_DIR}/lib" CFLAGS="-L${HDF5_DIR}/lib -L${PNETCDF_DIR}/lib -I${HDF5_DIR}/include -I${PNETCDF_DIR}/include"
   make -j
   make install

7. Set the environment variables.

   export PATH=/path/to/netcdf/bin:$PATH
   export LD_LIBRARY_PATH=/path/to/netcdf/lib:$LD_LIBRARY_PATH
   export NETCDF=/path/to/netcdf

8. Compile and install NetCDF-Fortran.

   cd ../netcdf-fortran-4.4.5
   ./configure --prefix=/path/to/netcdf --build=aarch64-unknown-linux-gnu --enable-shared --with-pic --disable-doxygen --enable-largefile --enable-static CPPFLAGS="-I${HDF5_DIR}/include -I${NETCDF}/include" LDFLAGS="-L${HDF5_DIR}/lib -L${NETCDF}/lib -Wl,-rpath=${HDF5_DIR}/lib -Wl,-rpath=${NETCDF}/lib" CFLAGS="-L${HDF5_DIR}/HDF5/lib -L${NETCDF}/lib -I${HDF5_DIR}/include -I${NETCDF}/include" CXXFLAGS="-L${HDF5_DIR}/lib -L${NETCDF}/lib -I${HDF5_DIR}/include -I${NETCDF}/include" FCFLAGS="-L${HDF5_DIR}/lib -L${NETCDF}/lib -I${HDF5_DIR}/include -I${NETCDF}/include"
   sed -i '11838c wl="-Wl,"' libtool
   make -j
   make install