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Installing PhyML

  1. Use PuTTY to log in to the server as the root user.
  2. Go to the following directory:
    cd /path/to/prottest
  3. Download the installation package.
    git clone https://github.com/stephaneguindon/phyml.git
  4. Perform the compilation and installation.
    cd phyml
sh autogen.sh
./configure --prefix=/path/to/prottest/phyml_install --enable-phyml
make
make install