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Configuration Description

Prerequisites

The installation packages have been uploaded to the server using an SFTP tool.

Configuration Process

Table 1 Configuration process

No.

Configuration Item

Remarks

1

Setting up the basic environment

See "Setting Up the Environment for the Cluster Scenario" in HPC Solution Basic Environment Setup Guide.

2

Installing the BiSheng Compiler

See "Installing BiSheng Compiler" in User Guide (BiSheng Compiler).

3

Installing dependencies

See Installing Dependencies.

4

Installing GeneMark

See Installing GeneMark.

5

Installing Augustus

See Augustus 3.3.3 Porting Guide.

6

Installing DIAMOND

See DIAMOND 2.0.15 Porting Guide.

7

Installing CDBtools

See Installing CDBtools.

8

Installing Samtools

See "Installing Samtools" in Augustus 3.3.3 Porting Guide.

9

Installing BamTools

See "Installing BamTools" in Augustus 3.3.3 Porting Guide.

10

Installing ProtHint

See Installing ProtHint.