Compilation and Installation

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Go to the main program installation directory.

   cd blasr

3. Load the HDF5 environment.

   export HDF5INCLUDEDIR=/path/to/HDF5/include
   export HDF5LIBDIR=/path/to/HDF5/lib

4. Perform the compilation and installation.

   make

   

   A BLASR executable file is generated in alignment/bin.