Running and Verifying FastTree

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Run the following command to go to the case directory and decompress the case:

   cd /home/CASE && gzip -d all.masked.gz

3. Run the following command to run the case:

   time OMP_NUM_THREADS=128 FastTreePar-2.1.11 -fastest -noml -gtr -nt all.masked > `hostname`_`date '+%Y%m%d%H%M%S'`.masked.ft.rooted

   Figure 1 shows the command output.

   Figure 1 Command output