Compiling and Installing Minimap2

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Install the Minimap2 dependency libraries and tools.

   yum install wget git gcc-c++ zlib -y

3. Decompress the installation package.

   cd /path/to/MINIMAP2
   unzip minimap2-master.zip

4. Compile Minimap2. Kunpeng is compatible with the Armv8 64-bit instruction set. Perform the compilation as follows:

   cd /path/to/MINIMAP2/minimap2-master
   make arm_neon=1 aarch64=1

5. Check the Minimap2 version.

   cd /path/to/MINIMAP2/minimap2-master
   ./minimap2 --v

   If the following information is displayed, the compilation is successful:

   2.17-r974-dirty