Installing RECON

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Download the installation package.

   cd /path/to/RepeatMasker
   wget http://www.repeatmasker.org/RepeatModeler/RECON-1.08.tar.gz
   tar xvf RECON-1.08.tar.gz

3. Go to the installation directory and perform the installation.

   cd RECON-1.08/src
   vim Makefile

   In line 15, change CC=gcc to CC=clang.

4. Perform the compilation.

   make
   make install