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Compilation and Installation

Procedure

  1. Use PuTTY to log in to the server as the root user.
  2. Install the dependencies.
    yum install -y patch
  3. Go to the installation directory and decompress the installation package.
    cd /path/to/rmblast
    tar -xvf ncbi-blast-2.10.0+-src.tar.gz
    gunzip isb-2.10.0+-rmblast.patch.gz
    cd ncbi-blast-2.10.0+-src
    patch -p1 < ../isb-2.10.0+-rmblast.patch
    cd c++
  4. Modify the configuration file.
    vim src/build-system/configure

    Comment out lines 8236 to 8238 and add lines 8239 to 8243. The modification is as follows:

  5. Create a compilation file.
    ./configure --with-mt --without-debug --without-krb5 --without-openssl --with-projects=scripts/projects/rmblastn/project.lst --prefix=/path/to/rmblast/rmblast_install
  6. Perform the compilation.
    make -j64
    make install