Installing HDF5

Procedure

1. Use PuTTY to log in to the server as the root user.
2. Decompress the HDF5 installation package.

   tar zxvf hdf5-1.10.1.tar.gz

3. Switch to the directory generated after the HDF5 installation package is decompressed.

   cd hdf5-1.10.1

4. Set environment variables before compilation.

   export MPICC=/path/to/OPENMPI/bin/mpicc
   export MPICXX=/path/to/OPENMPI/bin/mpicxx
   export MPIFC=/path/to/OPENMPI/bin/mpifort
   export CC=$MPICC
   export CXX=$MPICXX
   export FC=$MPIFC
   export F77=$MPIFC

5. Run the following command to perform the configuration:

   ./configure --prefix=/path/to/HDF5 --build=aarch64-unknown-linux-gnu --enable-fortran --enable-static=yes --enable-parallel --enable-shared --enable-fortran20

6. Run the following commands to compile and install HDF5:

   make -j 16
   make install

7. Load environment variables.

   export PATH=/path/to/HDF5/bin:$PATH
   export LD_LIBRARY_PATH=/path/to/HDF5/lib:$LD_LIBRARY_PATH