Compilation and Installation

Installing the I/O API

Use PuTTY to log in to the server as the root user.
Install SMOKE in csh.
```
csh
```

Set the environment variables.

setenv SMK_HOME /path/to/SMOKE
setenv LD_LIBRARY_PATH /path/to/BISHENG/bisheng-1.3.1/lib:/path/to/HMPI/hmpi-1.0.2/ompi/lib
setenv PATH /path/to/HMPI/hmpi-1.0.2/hmpi/bin:/path/to/BISHENG/bisheng-1.3.1/bin:$PATH
setenv LD_LIBRARY_PATH /path/to/NETCDF/lib:$LD_LIBRARY_PATH

Copy the installation packages to the installation path.

cp smoke_v47.gz $SMK_HOME
cp smoke_v47.nctox.data.tar.gz $SMK_HOME
cp smoke_install.csh $SMK_HOME
cp ioapi-3.2.tar.gz $SMK_HOME
cd $SMK_HOME
source smoke_install_v47.csh
setenv BIN Linux2_aarch64

Decompress and rename the ioapi file.

tar -xvf ioapi-3.2-2020111.tar.gz
mv ioapi-3.2-2020111 ioapi-3.2

Copy the configuration file.

cd ioapi-3.2
cp ioapi/Makeinclude.Linux2_ia64gfort ioapi/Makeinclude.Linux2_aarch64

Modify the Makeinclude.Linux2_aarch64 configuration file.
1. Open the Makeinclude.Linux2_aarch64 configuration file.
```
vi ioapi/Makeinclude.Linux2_aarch64
```
2. Press i to enter the edit mode and modify the compiler options (you can use an absolute path if necessary).
```
CC = mpicc
CXX = mpicxx
FC = mpif90
```
  Comment out the line corresponding to the FSFLAGS keyword, for example, #FSFLAGS = -save.
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Copy the Makefile file.
```
cp ioapi/Makefile.nocpl ioapi/Makefile
```

Copy the configuration file.

cp m3tools/Makefile.nocpl m3tools/Makefile

Modify the Makefile configuration file.
1. Open the Makefile configuration file.
```
vi m3tools/Makefile
```
2. Press i to enter the edit mode and modify the file as follows:
```
LIBS = -L${OBJDIR} -lioapi -L/path/to/NETCDF/lib -lnetcdff –lnetcdf -L/path/to/HDF5/lib -lhdf5_hl -lhdf5 -lz $(OMPLIBS) $(ARCHLIB) $(ARCHLIBS)
```
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Copy the configuration file.
```
cp Makefile.template Makefile
```
Edit the configuration file.
1. Open the configuration file.
```
vi Makefile
```
2. Press i to enter the edit mode.
  Modify the following content and remove the comments. (If the path is incorrect, check whether the path in BASEDIR is correct.)
```
BIN = Linux2_aarch64
BASEDIR = ${PWD}
INSTALL = ${HOME}
LIBINST = $(INSTALL)/$(BIN)
BININST = $(INSTALL)/$(BIN)
CPLMODE = nocpl
IOAPIDEFS = "-DIOAPI_NCF4"
```
  Modify NCFLIBS.
```
NCFLIBS = -L/path/to/NETCDF/lib -lnetcdff -lnetcdf -L/path/to/HDF5/lib -lhdf5_hl -lhdf5 -lz
```
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Compile the I/O API.
```
make BIN=Linux2_aarch64
```

Installing SMOKE

Use PuTTY to log in to the server as the root user.
Go to the $SMK_HOME/subsys/smoke/assigns/ directory.
```
cd $SMK_HOME/subsys/smoke/assigns/
```
Modify the ASSIGNS.nctox.cmaq.cb05_soa.us12-nc file.
1. Open the ASSIGNS.nctox.cmaq.cb05_soa.us12-nc file.
```
vi ASSIGNS.nctox.cmaq.cb05_soa.us12-nc
```
2. Press i to enter the edit mode and modify the content in line 25.
```
setenv BIN Linux2_aarch64
```
  After performing 3.a, press Esc, type :set nu, and press Enter to display the line number.
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Modify the Makeinclude file.
1. Open the Makeinclude file.
```
cd $SMK_HOME/subsys/smoke/src
vi Makeinclude
```
2. Press i to enter the edit mode and modify the following content. (If an error is reported for the link library, add the absolute path of the library in the format of -L/Absolute path.)
```
INSTDIR = ${OBJDIR}/${BIN}
#EFLAG = -extend-source 132 -zero
EFLAG = -ffixed-line-length-132 -fno-backslash
IOLIB = -L$(IOBIN) -lioapi -L/path/to/NETCDF/lib -lnetcdf -lnetcdff
IOBASE  = ${SMK_HOME}/ ioapi-3.2
```
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Modify the biog/normbeis361.f file.
1. Open the biog/normbeis361.f file.
```
vi biog/normbeis361.f
```
2. Press i to enter the insert mode and change the types of the IS_AG and IS_TAG functions in line 161 from INTEGER to LOGICAL.
  
  After performing 5.a, press Esc, type :set nu, and press Enter to display the line number.
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Modify the emutil/gentpro.f file.
1. Open the emutil/gentpro.f file.
```
vi emutil/gentpro.f
```
2. Press i to enter the edit mode and modify lines 1663 and 1695 of the file.
```
1663 (( PROF_MON( S,NP )), NP = 1,12 )
1695 ( ( PROF_DAY( S,NP ) ), NP = 1,31 )
```
  After performing 6.a, press Esc, type :set nu, and press Enter to display the line number.
3. Press Esc, type :wq!, and press Enter to save the file and exit.
Create the directory.
```
mkdir ${SMK_HOME}/subsys/smoke/${BIN}
```

Perform the compilation.

source $SMK_HOME/subsys/smoke/assigns/ASSIGNS.nctox.cmaq.cb05_soa.us12-nc
make

Parent topic: SMOKE 4.7 Porting Guide (openEuler 21.03)